STRINGSTRING
Noca_0300 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0300" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0300Hypothetical protein (98 aa)    
Predicted Functional Partners:
Noca_0299
Hypothetical protein (166 aa)
              0.859
Noca_0301
Hypothetical protein (61 aa)
              0.712
disA
DNA integrity scanning protein DisA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process (360 aa)
   
          0.701
Noca_3444
Methionine synthase, vitamin-B12 independent (338 aa)
   
          0.636
Noca_2959
Hypothetical protein (77 aa)
   
          0.562
Noca_3499
HNH endonuclease (117 aa)
   
          0.561
Noca_3198
N-acetyltransferase GCN5 (281 aa)
   
          0.541
Noca_3556
2’,5’ RNA ligase (179 aa)
   
          0.540
Noca_2758
Hypothetical protein (441 aa)
   
          0.538
Noca_0465
Hypothetical protein (108 aa)
   
          0.536
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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