STRINGSTRING
Noca_0306 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0306" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0306Hypothetical protein (98 aa)    
Predicted Functional Partners:
Noca_0307
Hypothetical protein (451 aa)
 
          0.894
Noca_0308
Hypothetical protein (482 aa)
 
          0.889
Noca_0303
Cell division protein FtsK (1326 aa)
 
          0.847
Noca_0305
Hypothetical protein (105 aa)
              0.752
Noca_0309
Peptidase S8/S53 subtilisin kexin sedolisin (424 aa)
 
          0.738
Noca_0109
Hypothetical protein (797 aa)
   
          0.614
Noca_2421
Putative signal peptide (439 aa)
   
          0.536
Noca_0304
Hypothetical protein (471 aa)
              0.492
Noca_3776
Hypothetical protein (380 aa)
   
          0.490
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (595 aa)
   
          0.459
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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