STRINGSTRING
Noca_0320 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0320" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0320Hypothetical protein (197 aa)    
Predicted Functional Partners:
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (199 aa)
 
          0.892
Noca_0318
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (124 aa)
              0.859
Noca_0317
DNA polymerase III subunits gamma and tau (678 aa)
              0.781
Noca_0906
Hypothetical protein (189 aa)
   
          0.767
Noca_3481
Stage II sporulation E family protein (367 aa)
   
          0.757
Noca_0321
Aspartate kinase (424 aa)
              0.734
Noca_3958
Hypothetical protein (118 aa)
   
          0.734
Noca_3123
Hypothetical protein (424 aa)
   
          0.708
Noca_2946
Hypothetical protein (198 aa)
   
          0.701
Noca_1464
Hypothetical protein (215 aa)
   
          0.682
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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