STRINGSTRING
Noca_0324 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0324" - Metallophosphoesterase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0324Metallophosphoesterase (320 aa)    
Predicted Functional Partners:
Noca_0325
GatB/Yqey domain-containing protein (154 aa)
              0.764
Noca_0335
Hypothetical protein (51 aa)
 
          0.753
Noca_0503
ResB family protein (532 aa)
   
        0.651
Noca_2298
Hypothetical protein (238 aa)
   
          0.646
Noca_2201
ResB family protein (532 aa)
   
        0.634
Noca_0465
Hypothetical protein (108 aa)
   
          0.626
Noca_4250
Glycine cleavage T protein (aminomethyl transferase) (324 aa)
   
        0.598
Noca_2911
Hypothetical protein (96 aa)
   
          0.538
Noca_2710
Regulatory protein MerR (198 aa)
 
          0.533
Noca_0337
NUDIX hydrolase (290 aa)
 
   
    0.530
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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