STRINGSTRING
Noca_0348 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0348" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0348Hypothetical protein (120 aa)    
Predicted Functional Partners:
Noca_0347
SSS family solute/sodium (Na+) symporter (534 aa)
 
   
  0.993
Noca_0355
Na+/solute symporter (505 aa)
 
   
  0.912
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (664 aa)
   
        0.818
Noca_0860
AMP-dependent synthetase and ligase (541 aa)
   
        0.613
Noca_3340
Hypothetical protein (303 aa)
   
          0.611
Noca_3085
Hypothetical protein (140 aa)
   
          0.562
Noca_0356
Hypothetical protein (125 aa)
 
          0.516
Noca_3035
Hypothetical protein (210 aa)
   
          0.507
Noca_2835
Major facilitator transporter (428 aa)
   
          0.479
Noca_4348
Hypothetical protein (160 aa)
   
          0.456
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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