STRINGSTRING
Noca_0354 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0354" - Bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0354Bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein (372 aa)    
Predicted Functional Partners:
Noca_2600
uroporphyrinogen-III C-methyltransferase (407 aa)
   
 
  0.993
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (314 aa)
   
  0.991
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
 
 
  0.984
Noca_0496
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase (552 aa)
   
 
  0.970
Noca_0352
Assimilatory nitrite reductase (NAD(P)H) large subunit (838 aa)
 
   
  0.936
Noca_0351
Assimilatory nitrate reductase (NADH) subunit beta (460 aa)
 
   
  0.931
Noca_0353
Assimilatory nitrite reductase (NAD(P)H) small subunit (125 aa)
 
   
  0.930
Noca_3409
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (526 aa)
       
  0.900
Noca_2892
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (507 aa)
       
  0.900
Noca_0497
Delta-aminolevulinic acid dehydratase (333 aa)
   
  0.896
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]