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Noca_0370 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0370" - DEAD/DEAH box helicase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0370DEAD/DEAH box helicase (778 aa)    
Predicted Functional Partners:
Noca_0369
Hypothetical protein (103 aa)
              0.840
Noca_0371
Anti-anti-sigma factor (112 aa)
              0.662
Noca_0138
SNF2-like protein (903 aa)
 
      0.536
Noca_3593
ATP-dependent DNA helicase PcrA (797 aa)
   
 
  0.526
Noca_1516
UvrD/REP helicase (688 aa)
   
 
  0.526
Noca_1509
UvrD/REP helicase (1073 aa)
   
 
  0.526
Noca_1508
UvrD/REP helicase (1060 aa)
   
 
  0.526
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (905 aa)
   
   
  0.521
Noca_0133
DEAD/DEAH box helicase (714 aa)
   
 
0.518
Noca_4549
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII (419 aa)
     
      0.512
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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