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araA protein (Nocardioides sp. JS614) - STRING interaction network
"araA" - L-arabinose isomerase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (502 aa)    
Predicted Functional Partners:
araB
Ribulokinase (567 aa)
 
 
  0.999
Noca_0381
L-ribulose-5-phosphate 4-epimerase (238 aa)
 
   
  0.987
Noca_3397
Xylulokinase (465 aa)
       
  0.845
Noca_0383
Xylose ABC transporter, substrate-binding protein (361 aa)
 
     
  0.764
Noca_3685
Carbohydrate kinase (510 aa)
       
  0.719
Noca_3313
Carbohydrate kinase (503 aa)
       
  0.719
Noca_1655
Carbohydrate kinase (549 aa)
       
  0.719
Noca_0384
ABC transporter-like protein (509 aa)
         
  0.712
Noca_0379
LacI family transcriptional regulator (342 aa)
         
  0.698
Noca_0398
Class II aldolase/adducin family protein (214 aa)
 
   
  0.624
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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