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Noca_0383 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0383" - Xylose ABC transporter, substrate-binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0383Xylose ABC transporter, substrate-binding protein (361 aa)    
Predicted Functional Partners:
Noca_0385
Inner-membrane translocator (429 aa)
 
  0.993
Noca_0384
ABC transporter-like protein (509 aa)
 
 
  0.981
Noca_2378
Inner-membrane translocator (419 aa)
 
  0.948
Noca_2377
ABC transporter-like protein (252 aa)
 
 
  0.810
Noca_3319
ABC transporter-like protein (499 aa)
   
 
  0.795
Noca_0100
ABC transporter-like protein (527 aa)
   
 
  0.795
Noca_0076
ABC transporter-like protein (507 aa)
   
 
  0.795
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (502 aa)
 
     
  0.764
Noca_0807
ABC transporter-like protein (497 aa)
   
 
  0.725
araB
Ribulokinase (567 aa)
 
     
  0.719
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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