STRINGSTRING
Noca_0390 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0390" - Peptidase U34, dipeptidase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0390Peptidase U34, dipeptidase (396 aa)    
Predicted Functional Partners:
Noca_0389
Amine oxidase (449 aa)
 
          0.932
Noca_4007
Hypothetical protein (249 aa)
   
          0.745
Noca_4000
Amine oxidase (499 aa)
 
          0.684
Noca_0392
LysR family transcriptional regulator (316 aa)
              0.657
Noca_0391
Limonene-1,2-epoxide hydrolase (134 aa)
              0.657
Noca_4647
NC domain-containing protein (149 aa)
   
          0.604
Noca_0393
Hypothetical protein (60 aa)
              0.495
Noca_0282
Hypothetical protein (289 aa)
   
          0.483
Noca_0923
Triple helix repeat-containing collagen (236 aa)
   
          0.459
Noca_4252
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands (164 aa)
   
          0.452
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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