STRINGSTRING
Noca_0418 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0418" - Ribonuclease H in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0418Ribonuclease H (143 aa)    
Predicted Functional Partners:
Noca_3006
DNA polymerase I (889 aa)
 
 
  0.780
Noca_4559
Prolyl aminopeptidase 2 (421 aa)
 
 
        0.770
Noca_3992
Oxidoreductase domain-containing protein (336 aa)
 
        0.764
Noca_0544
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (231 aa)
 
            0.727
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (527 aa)
   
   
  0.686
Noca_3128
Hypothetical protein (601 aa)
   
   
  0.678
Noca_2250
DNA primase catalytic core (1976 aa)
   
 
  0.666
Noca_1580
DNA primase catalytic core (1797 aa)
   
 
  0.666
Noca_0417
Hypothetical protein (144 aa)
              0.642
Noca_1947
DNA primase (932 aa)
 
     
  0.640
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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