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Noca_0420 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0420" - HxlR type helix-turn-helix domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0420HxlR type helix-turn-helix domain-containing protein (115 aa)    
Predicted Functional Partners:
Noca_0421
NmrA family protein (285 aa)
 
        0.876
Noca_2181
NmrA family protein (284 aa)
 
        0.662
Noca_4544
NADH-flavin oxidoreductase (355 aa)
 
          0.462
Noca_4577
2,4-dienoyl-CoA reductase (668 aa)
   
        0.414
Noca_0618
NADH-flavin oxidoreductase (723 aa)
   
        0.414
Noca_0579
NADH-flavin oxidoreductase (699 aa)
   
        0.414
Noca_4565
NAD-dependent epimerase/dehydratase (298 aa)
   
        0.413
Noca_2657
NAD-dependent epimerase/dehydratase (230 aa)
   
        0.413
Noca_1499
NmrA family protein (224 aa)
   
        0.413
Noca_0576
Hypothetical protein (434 aa)
   
        0.413
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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