STRINGSTRING
Noca_0457 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0457" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0457Hypothetical protein (362 aa)    
Predicted Functional Partners:
Noca_0458
Hypothetical protein (304 aa)
              0.861
Noca_0456
Glycosyl transferase family protein (370 aa)
   
        0.668
Noca_4153
Hypothetical protein (863 aa)
   
          0.553
Noca_4068
Endoribonuclease L-PSP (405 aa)
   
          0.489
Noca_3376
FAD linked oxidase domain-containing protein (726 aa)
   
          0.469
Noca_1354
Hypothetical protein (496 aa)
   
          0.454
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (334 aa)
              0.436
Noca_0459
Hypothetical protein (272 aa)
              0.436
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (135 aa)
              0.426
Noca_2000
Hypothetical protein (526 aa)
   
          0.421
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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