STRINGSTRING
Noca_0472 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0472" - Type 11 methyltransferase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0472Type 11 methyltransferase (251 aa)    
Predicted Functional Partners:
Noca_0473
Hypothetical protein (212 aa)
              0.856
Noca_0656
Hypothetical protein (299 aa)
   
          0.585
Noca_0474
Hypothetical protein (256 aa)
              0.568
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (297 aa)
   
   
    0.547
Noca_2595
Peptidase C60, sortase A and B (213 aa)
   
          0.495
Noca_1385
Hypothetical protein (229 aa)
   
          0.491
Noca_3563
TetR family transcriptional regulator (203 aa)
   
          0.487
Noca_2332
Regulatory protein TetR (189 aa)
   
          0.452
Noca_0199
Hydantoin racemase-like protein (264 aa)
   
          0.451
Noca_2815
Hypothetical protein (63 aa)
   
          0.448
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]