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Noca_0478 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0478" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0478ABC transporter-like protein (249 aa)    
Predicted Functional Partners:
Noca_0479
ABC transporter (245 aa)
  0.984
Noca_0477
TetR family transcriptional regulator (202 aa)
 
          0.896
Noca_2544
ABC transporter (265 aa)
   
  0.786
Noca_1483
ABC transporter (269 aa)
   
  0.786
Noca_0121
ABC transporter (252 aa)
   
  0.786
Noca_0475
Ppx/GppA phosphatase (311 aa)
              0.765
Noca_0476
Xylose isomerase domain-containing protein (262 aa)
              0.765
Noca_2212
Putative ABC antibiotics transporter (528 aa)
 
    0.731
Noca_2560
Putative ABC transporter (523 aa)
 
    0.721
Noca_1666
Putative ABC antibiotics transporter (548 aa)
 
    0.719
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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