STRINGSTRING
Noca_0566 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0566" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0566Hypothetical protein (75 aa)    
Predicted Functional Partners:
Noca_0565
Phage integrase family protein (459 aa)
 
          0.903
glnE
Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Adenylation and deadenylation of glutamate--ammonia ligase (995 aa)
   
          0.676
Noca_0417
Hypothetical protein (144 aa)
   
          0.557
Noca_2142
Hypothetical protein (352 aa)
   
          0.513
Noca_2905
Hypothetical protein (238 aa)
   
          0.509
Noca_3549
Integral membrane protein (277 aa)
   
          0.491
Noca_0568
Hypothetical protein (99 aa)
              0.449
Noca_0567
Hypothetical protein (436 aa)
              0.449
Noca_0947
Pyridoxamine 5’-phosphate oxidase-like protein (154 aa)
   
          0.441
Noca_3547
Fumarate reductase iron-sulfur subunit (258 aa)
   
          0.425
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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