STRINGSTRING
Noca_0578 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0578" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0578Hypothetical protein (114 aa)    
Predicted Functional Partners:
Noca_4030
Microcompartments protein (104 aa)
   
   
  0.478
Noca_4626
Methylmalonate-semialdehyde dehydrogenase (498 aa)
   
   
  0.468
Noca_4598
Succinate semialdehyde dehydrogenase (485 aa)
   
   
  0.468
Noca_4493
Phenylacetic acid degradation protein paaN (557 aa)
   
   
  0.468
Noca_4473
Succinate semialdehyde dehydrogenase (486 aa)
   
   
  0.468
Noca_4281
Aldehyde dehydrogenase (481 aa)
   
   
  0.468
Noca_4188
Aldehyde dehydrogenase (452 aa)
   
   
  0.468
Noca_4031
Acetaldehyde dehydrogenase (511 aa)
   
   
  0.468
Noca_3634
Aldehyde dehydrogenase (480 aa)
   
   
  0.468
Noca_3633
Succinate-semialdehyde dehydrogenase (540 aa)
   
   
  0.468
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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