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Noca_0604 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0604" - Sugar ABC transporter periplasmic component-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0604Sugar ABC transporter periplasmic component-like protein (391 aa)    
Predicted Functional Partners:
Noca_0101
Inner-membrane translocator (342 aa)
 
   
    0.959
Noca_0680
Inner-membrane translocator (343 aa)
 
   
    0.945
Noca_0075
Sugar ABC transporter periplasmic component-like protein (336 aa)
   
   
    0.941
Noca_0808
Inner-membrane translocator (353 aa)
 
   
    0.940
Noca_0806
Sugar ABC transporter periplasmic component-like protein (398 aa)
   
   
 
0.929
Noca_0679
Sugar ABC transporter periplasmic component-like protein (387 aa)
   
   
 
0.929
Noca_0099
Sugar ABC transporter periplasmic component-like protein (400 aa)
   
   
 
0.928
Noca_3320
ABC sugar transporter, periplasmic ligand binding protein (348 aa)
   
   
    0.919
Noca_0610
Inner-membrane translocator (358 aa)
   
   
    0.909
Noca_0588
Sugar ABC transporter periplasmic component-like protein (390 aa)
   
   
 
0.902
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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