STRINGSTRING
Noca_0654 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0654" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0654Hypothetical protein (522 aa)    
Predicted Functional Partners:
Noca_3234
Hypothetical protein (361 aa)
   
          0.656
Noca_0659
Group 1 glycosyl transferase (370 aa)
   
          0.640
Noca_0653
Monooxygenase (484 aa)
              0.632
Noca_1817
Hypothetical protein (497 aa)
   
          0.605
Noca_4675
Integral membrane protein (496 aa)
 
          0.570
Noca_3709
Peptidase S15 (519 aa)
   
          0.538
Noca_3084
Polyprenyl synthetase (358 aa)
 
          0.531
Noca_3352
Putative transcriptional regulator (228 aa)
   
          0.499
Noca_2998
Hypothetical protein (1342 aa)
   
          0.460
Noca_2999
Type 11 methyltransferase (246 aa)
   
          0.434
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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