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Noca_0657 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0657" - Homogentisate 1,2-dioxygenase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0657Homogentisate 1,2-dioxygenase (404 aa)    
Predicted Functional Partners:
Noca_1295
4-hydroxyphenylpyruvate dioxygenase (397 aa)
 
 
  0.998
Noca_0655
Fumarylacetoacetate hydrolase (391 aa)
 
   
  0.961
Noca_0656
Hypothetical protein (299 aa)
 
          0.939
Noca_0658
Aldo/keto reductase (288 aa)
   
        0.818
Noca_1186
Fumarylacetoacetate (FAA) hydrolase (280 aa)
   
   
  0.651
Noca_4551
Carbamoyl-phosphate synthase subunit L (633 aa)
     
        0.637
Noca_3510
Carbamoyl-phosphate synthase subunit L (590 aa)
     
        0.637
Noca_0148
Carbamoyl-phosphate synthase subunit L (634 aa)
     
        0.637
Noca_3337
5-carboxymethyl-2-hydroxymuconate delta-isomerase (269 aa)
   
   
  0.626
Noca_0211
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (284 aa)
   
   
  0.626
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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