STRINGSTRING
Noca_0661 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0661" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0661Hypothetical protein (282 aa)    
Predicted Functional Partners:
Noca_3132
Hypothetical protein (139 aa)
   
          0.663
Noca_0662
Oxidoreductase alpha (molybdopterin) subunit (793 aa)
              0.592
Noca_3635
Hypothetical protein (373 aa)
   
        0.578
Noca_2731
Luciferase family protein (352 aa)
   
          0.541
Noca_3806
ERCC4 domain-containing protein (330 aa)
   
          0.474
Noca_3029
Hypothetical protein (127 aa)
   
          0.471
Noca_0663
Pirin domain-containing protein (351 aa)
              0.471
Noca_3776
Hypothetical protein (380 aa)
   
          0.462
Noca_0391
Limonene-1,2-epoxide hydrolase (134 aa)
   
          0.455
Noca_4433
Hypothetical protein (278 aa)
   
          0.420
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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