STRINGSTRING
Noca_0714 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0714" - Geranylgeranyl reductase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0714Geranylgeranyl reductase (415 aa)    
Predicted Functional Partners:
Noca_1816
Electron transfer flavoprotein subunit alpha (317 aa)
 
 
  0.863
Noca_0639
Electron transfer flavoprotein subunit alpha (321 aa)
 
 
  0.863
Noca_0715
NUDIX hydrolase (299 aa)
              0.856
Noca_1815
Electron transfer flavoprotein subunit beta (266 aa)
 
 
  0.821
Noca_0640
Electron transfer flavoprotein subunit beta (266 aa)
   
 
  0.798
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
   
  0.708
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
   
  0.708
Noca_0713
Hypothetical protein (167 aa)
              0.676
Noca_3084
Polyprenyl synthetase (358 aa)
   
 
  0.606
Noca_0534
Trans-hexaprenyltranstransferase (334 aa)
   
 
  0.606
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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