STRINGSTRING
Noca_0723 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0723" - Glycoside hydrolase family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0723Glycoside hydrolase family protein (362 aa)    
Predicted Functional Partners:
Noca_0725
FAD linked oxidase domain-containing protein (906 aa)
              0.601
Noca_0724
Iron-containing alcohol dehydrogenase (418 aa)
              0.601
Noca_1251
Fibronectin, type III domain-containing protein (497 aa)
   
   
    0.552
Noca_4617
Cellulase (341 aa)
   
   
    0.546
Noca_1603
Phosphatidylinositol-3-phosphate phosphatase (273 aa)
   
          0.542
Noca_3501
Cellulase (346 aa)
   
   
    0.534
Noca_4330
Peptidoglycan binding domain-containing protein (485 aa)
   
          0.495
Noca_1678
CDP-alcohol phosphatidyltransferase (660 aa)
   
          0.485
Noca_0722
Hypothetical protein (97 aa)
              0.479
Noca_1007
Phosphoesterase (305 aa)
   
          0.456
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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