STRINGSTRING
Noca_0774 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0774" - Regulatory protein MarR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0774Regulatory protein MarR (155 aa)    
Predicted Functional Partners:
Noca_0773
Major facilitator transporter (518 aa)
 
          0.836
Noca_2759
Regulatory protein MarR (140 aa)
   
          0.731
Noca_2835
Major facilitator transporter (428 aa)
   
          0.568
csrA
Carbon storage regulator; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (83 aa)
              0.460
Noca_4426
Hypothetical protein (205 aa)
   
          0.436
Noca_3830
Ferric reductase domain-containing protein (195 aa)
   
          0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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