STRINGSTRING
Noca_0837 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0837" - Muconolactone delta-isomerase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0837Muconolactone delta-isomerase (95 aa)    
Predicted Functional Partners:
Noca_0835
Mandelate racemase/muconate lactonizing protein (367 aa)
 
 
  0.997
Noca_1011
4-carboxymuconolactone decarboxylase (402 aa)
 
 
  0.990
Noca_0836
Catechol 1,2-dioxygenase (287 aa)
 
   
  0.986
Noca_0827
Aromatic-ring-hydroxylating dioxygenase subunit beta (196 aa)
 
   
  0.920
Noca_0826
Rieske (2Fe-2S) domain-containing protein (443 aa)
 
   
  0.918
Noca_0833
Alpha/beta hydrolase fold protein (287 aa)
 
 
  0.872
Noca_0834
Substrate-binding protein LysR (330 aa)
 
          0.817
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) (320 aa)
 
 
  0.798
Noca_0683
Rieske (2Fe-2S) domain-containing protein (424 aa)
 
   
  0.784
Noca_4176
Mandelate racemase/muconate lactonizing protein (376 aa)
   
 
  0.735
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (16%) [HD]