STRINGSTRING
Noca_0841 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0841" - GntR family transcriptional regulator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0841GntR family transcriptional regulator (246 aa)    
Predicted Functional Partners:
Noca_0840
Regulatory protein MarR (170 aa)
              0.859
Noca_4063
GntR family transcriptional regulator (242 aa)
   
          0.778
Noca_0402
GntR family transcriptional regulator (239 aa)
   
 
  0.772
Noca_2588
GntR family transcriptional regulator (248 aa)
   
          0.771
Noca_0845
Mandelate racemase/muconate lactonizing protein (392 aa)
   
   
  0.742
Noca_0011
GntR family transcriptional regulator (249 aa)
   
          0.734
Noca_0844
Thiolase (384 aa)
   
   
  0.722
Noca_0843
Hypothetical protein (145 aa)
              0.700
Noca_0842
Hypothetical protein (78 aa)
              0.700
Noca_0035
GntR family transcriptional regulator (230 aa)
   
   
  0.670
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]