STRINGSTRING
Noca_0873 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0873" - Ribokinase-like domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0873Ribokinase-like domain-containing protein (315 aa)    
Predicted Functional Partners:
Noca_0869
Extracellular solute-binding protein (444 aa)
 
          0.880
Noca_0870
Binding-protein-dependent transport system inner membrane protein (309 aa)
              0.869
Noca_0871
Binding-protein-dependent transport systems inner membrane component (284 aa)
              0.861
Noca_0872
Sugar isomerase (SIS) (328 aa)
              0.859
Noca_0874
Ferric-uptake regulator (146 aa)
              0.748
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (760 aa)
              0.664
Noca_0868
ROK family protein (400 aa)
              0.657
Noca_0545
Ribokinase-like domain-containing protein (304 aa)
   
          0.618
Noca_4622
Ribokinase-like domain-containing protein (369 aa)
   
          0.543
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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