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Noca_0947 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0947" - Pyridoxamine 5'-phosphate oxidase-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0947Pyridoxamine 5’-phosphate oxidase-like protein (154 aa)    
Predicted Functional Partners:
Noca_0946
GAF domain-containing protein (536 aa)
 
          0.878
Noca_0996
UspA domain-containing protein (296 aa)
   
          0.718
Noca_0948
UspA domain-containing protein (290 aa)
 
          0.678
Noca_1454
Hypothetical protein (473 aa)
   
          0.645
Noca_0417
Hypothetical protein (144 aa)
   
          0.635
Noca_3755
Hypothetical protein (451 aa)
   
          0.634
Noca_3360
Regulatory protein TetR (208 aa)
   
          0.622
Noca_0949
Hypothetical protein (132 aa)
              0.618
Noca_0929
Septum formation initiator (184 aa)
   
          0.533
Noca_1000
UspA domain-containing protein (293 aa)
   
          0.482
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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