STRINGSTRING
Noca_0957 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0957" - Periplasmic binding protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0957Periplasmic binding protein (282 aa)    
Predicted Functional Partners:
Noca_2017
Ribonuclease II (467 aa)
     
      0.878
Noca_2576
ABC transporter-like protein (264 aa)
   
 
    0.807
Noca_2887
Cobyrinic acid a,c-diamide synthase (803 aa)
       
  0.764
Noca_2718
CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase (200 aa)
       
      0.736
Noca_2380
CDP-diacylglycerol inositol 3-phosphatidyltransferase (206 aa)
       
      0.736
Noca_2320
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (202 aa)
       
      0.736
Noca_2067
CDP-alcohol phosphatidyltransferase (215 aa)
       
      0.736
Noca_3409
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (526 aa)
   
        0.628
Noca_2892
Precorrin-3 methyltransferase / precorrin-2 C20-methyltransferase (507 aa)
   
        0.628
Noca_2890
precorrin-6Y C5,15-methyltransferase (398 aa)
         
  0.622
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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