STRINGSTRING
Noca_0998 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0998" - P-type HAD superfamily ATPase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0998P-type HAD superfamily ATPase (844 aa)    
Predicted Functional Partners:
Noca_0997
UspA domain-containing protein (306 aa)
   
   
  0.924
Noca_1662
Heavy metal translocating P-type ATPase (656 aa)
 
0.849
Noca_2922
Copper-translocating P-type ATPase (928 aa)
 
0.846
Noca_2207
Heavy metal translocating P-type ATPase (656 aa)
 
0.846
Noca_0314
Heavy metal translocating P-type ATPase (818 aa)
 
0.844
Noca_3746
Heavy metal translocating P-type ATPase (1071 aa)
 
0.841
Noca_3788
Heavy metal translocating P-type ATPase (785 aa)
 
0.838
Noca_3022
Glutamate synthase (NADH) large subunit (1519 aa)
   
   
  0.643
Noca_4676
Glycosyl transferase family protein (778 aa)
     
      0.608
Noca_0326
Glycosyl transferase family protein (807 aa)
     
      0.608
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]