STRINGSTRING
Noca_1002 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1002" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1002Hypothetical protein (144 aa)    
Predicted Functional Partners:
Noca_0993
Putative DNA-binding protein (140 aa)
   
          0.778
Noca_0996
UspA domain-containing protein (296 aa)
   
          0.636
Noca_4152
Hypothetical protein (201 aa)
   
          0.612
Noca_1001
Beta-lactamase domain-containing protein (460 aa)
              0.554
Noca_1000
UspA domain-containing protein (293 aa)
 
          0.549
Noca_2758
Hypothetical protein (441 aa)
   
          0.506
Noca_1321
Hypothetical protein (270 aa)
   
          0.488
Noca_3832
Hypothetical protein (64 aa)
   
          0.482
Noca_2455
Hypothetical protein (184 aa)
   
          0.479
Noca_1322
Hypothetical protein (271 aa)
   
          0.477
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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