STRINGSTRING
Noca_1020 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1020" - Response regulator receiver in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1020Response regulator receiver (218 aa)    
Predicted Functional Partners:
Noca_1019
Histidine kinase, dimerisation and phosphoacceptor region (392 aa)
 
  0.987
Noca_3119
ATPase domain-containing protein (535 aa)
 
  0.932
Noca_2942
ATPase domain-containing protein (485 aa)
 
  0.930
Noca_2634
ATPase domain-containing protein (434 aa)
 
 
  0.905
Noca_0946
GAF domain-containing protein (536 aa)
 
 
  0.851
Noca_0994
GAF domain-containing protein (577 aa)
 
 
  0.844
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
       
  0.785
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
       
  0.785
Noca_1392
PAS sensor protein (977 aa)
 
 
  0.757
Noca_4311
PAS/PAC sensor hybrid histidine kinase (1090 aa)
 
 
  0.757
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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