STRINGSTRING
Noca_1023 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1023" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1023Hypothetical protein (63 aa)    
Predicted Functional Partners:
Noca_1021
ABC transporter-like protein (298 aa)
   
        0.562
Noca_1022
Hypothetical protein (265 aa)
              0.555
Noca_0452
ABC transporter-like protein (344 aa)
       
      0.534
Noca_2355
TrkA domain-containing protein (366 aa)
     
      0.520
Noca_1461
TrkA domain-containing protein (653 aa)
     
      0.520
Noca_1980
FMN-dependent alpha-hydroxy acid dehydrogenase (356 aa)
       
      0.512
Noca_0280
(S)-2-hydroxy-acid oxidase (410 aa)
       
      0.512
thyA
Thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (273 aa)
       
    0.461
Noca_1024
Transposase IS116/IS110/IS902 family protein (412 aa)
              0.449
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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