Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Noca_1028 | Noca_1029 | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | 0.773 |
Noca_1028 | Noca_1030 | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | Hypothetical protein. | 0.773 |
Noca_1028 | Noca_1031 | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | Hypothetical protein. | 0.689 |
Noca_1028 | Noca_1032 | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | Hypothetical protein. | 0.537 |
Noca_1028 | Noca_1033 | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: tac:Ta0575 probable aspartate carbamoyltransferase, catalytic chain. | 0.517 |
Noca_1028 | Noca_1034 | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | PFAM: Radical SAM domain protein; KEGG: rpe:RPE_3191 radical SAM domain protein. | 0.505 |
Noca_1029 | Noca_1028 | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | 0.773 |
Noca_1029 | Noca_1030 | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | Hypothetical protein. | 0.773 |
Noca_1029 | Noca_1031 | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | Hypothetical protein. | 0.689 |
Noca_1029 | Noca_1032 | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | Hypothetical protein. | 0.537 |
Noca_1029 | Noca_1033 | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: tac:Ta0575 probable aspartate carbamoyltransferase, catalytic chain. | 0.482 |
Noca_1029 | Noca_1034 | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | PFAM: Radical SAM domain protein; KEGG: rpe:RPE_3191 radical SAM domain protein. | 0.482 |
Noca_1030 | Noca_1028 | Hypothetical protein. | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | 0.773 |
Noca_1030 | Noca_1029 | Hypothetical protein. | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | 0.773 |
Noca_1030 | Noca_1031 | Hypothetical protein. | Hypothetical protein. | 0.689 |
Noca_1030 | Noca_1032 | Hypothetical protein. | Hypothetical protein. | 0.537 |
Noca_1030 | Noca_1033 | Hypothetical protein. | PFAM: aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: tac:Ta0575 probable aspartate carbamoyltransferase, catalytic chain. | 0.482 |
Noca_1030 | Noca_1034 | Hypothetical protein. | PFAM: Radical SAM domain protein; KEGG: rpe:RPE_3191 radical SAM domain protein. | 0.482 |
Noca_1031 | Noca_1028 | Hypothetical protein. | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mbu:Mbur_1610 DegT/DnrJ/EryC1/StrS aminotransferase. | 0.689 |
Noca_1031 | Noca_1029 | Hypothetical protein. | PFAM: AAA ATPase, central domain protein; KEGG: tde:TDE1329 ATPase, AAA family. | 0.689 |
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