STRINGSTRING
Noca_1042 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1042" - Oxygenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1042Oxygenase (354 aa)    
Predicted Functional Partners:
Noca_1043
Hypothetical protein (272 aa)
              0.859
Noca_1041
Hypothetical protein (408 aa)
              0.653
Noca_0257
Hypothetical protein (147 aa)
   
          0.591
Noca_0172
Hypothetical protein (155 aa)
   
          0.503
Noca_3724
Putative phosphodiesterase (222 aa)
   
          0.490
Noca_2498
Hypothetical protein (173 aa)
   
          0.469
Noca_1114
Cytosine/purines uracil thiamine allantoin permease (492 aa)
   
          0.424
Noca_1464
Hypothetical protein (215 aa)
   
          0.423
Noca_4232
Putative thioredoxin (170 aa)
   
          0.416
Noca_2694
Serine/threonine protein kinase (422 aa)
   
          0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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