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Noca_1079 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1079" - Exodeoxyribonuclease III in Nocardioides sp. JS614
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Noca_1079Exodeoxyribonuclease III (262 aa)    
Predicted Functional Partners:
nth
Endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (243 aa)
 
 
  0.971
Noca_0002
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (408 aa)
   
  0.897
Noca_0467
HhH-GPD family protein (288 aa)
     
  0.870
Noca_3006
DNA polymerase I (889 aa)
     
  0.852
Noca_3301
DNA-3-methyladenine glycosylase II / transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase (494 aa)
   
  0.825
Noca_2841
Hypothetical protein (313 aa)
   
  0.811
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (230 aa)
   
  0.721
Noca_2842
5’-3’ exonuclease (289 aa)
     
  0.683
Noca_2659
5’-3’ exonuclease (301 aa)
     
  0.683
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (509 aa)
   
 
  0.669
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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