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Noca_1106 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1106" - Restriction modification system DNA specificity subunit in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1106Restriction modification system DNA specificity subunit (161 aa)    
Predicted Functional Partners:
Noca_1104
Type I restriction-modification system, M subunit (519 aa)
 
  0.994
Noca_1107
HsdR family type I site-specific deoxyribonuclease (1013 aa)
 
   
  0.990
Noca_1105
Restriction modification system DNA specificity subunit (225 aa)
       
0.980
Noca_1103
Hypothetical protein (726 aa)
   
   
  0.804
Noca_3006
DNA polymerase I (889 aa)
     
 
  0.769
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
           
  0.595
xerC
Phage integrase family protein (312 aa)
   
   
  0.569
Noca_2265
Phage integrase family protein (411 aa)
   
   
  0.569
Noca_2293
Phage integrase family protein (395 aa)
   
   
  0.569
Noca_2265
Phage integrase family protein (411 aa)
   
   
  0.569
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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