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Noca_1118 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1118" - FliA/WhiG family RNA polymerase sigma factor in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1118FliA/WhiG family RNA polymerase sigma factor (244 aa)    
Predicted Functional Partners:
Noca_0758
Flagellar motor switch protein FliG (341 aa)
 
   
  0.947
Noca_0745
Flagellar motor switch protein FliN (246 aa)
 
   
  0.945
Noca_0761
Flagellar basal-body rod protein (130 aa)
 
 
  0.941
Noca_0756
FliI/YscN family ATPase (435 aa)
 
 
  0.932
Noca_0751
Hypothetical protein (282 aa)
 
   
  0.930
Noca_0769
Flagellar hook-associated protein FlgK (466 aa)
 
   
  0.925
Noca_0766
Flagellin domain-containing protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (376 aa)
 
   
  0.918
Noca_0739
Flagellar biosynthesis protein FlhA (681 aa)
   
  0.918
Noca_0746
Flagellar motor switch protein FliM (335 aa)
 
   
  0.914
Noca_0741
Flagellar biosynthetic protein FliR (253 aa)
 
   
  0.904
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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