STRINGSTRING
Noca_1148 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1148" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1148Hypothetical protein (268 aa)    
Predicted Functional Partners:
Noca_1147
Hypothetical protein (487 aa)
              0.654
Noca_1146
Hypothetical protein (123 aa)
              0.647
Noca_2797
Hypothetical protein (384 aa)
   
          0.613
Noca_2796
Hypothetical protein (222 aa)
   
          0.606
Noca_0189
LuxR family transcriptional regulator (340 aa)
   
          0.589
Noca_0648
Putative DnaK suppressor protein (92 aa)
   
          0.574
Noca_0996
UspA domain-containing protein (296 aa)
   
          0.573
Noca_0703
Virulence factor Mce family protein (425 aa)
   
          0.560
Noca_3127
Hypothetical protein (88 aa)
   
          0.538
Noca_2824
Virulence factor Mce family protein (436 aa)
   
          0.534
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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