Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Noca_1156 | Noca_1158 | Noca_1156 | Noca_1158 | KEGG: cch:Cag_1709 hypothetical protein. | Hypothetical protein. | 0.472 |
Noca_1156 | mshB | Noca_1156 | Noca_1157 | KEGG: cch:Cag_1709 hypothetical protein. | LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.554 |
Noca_1158 | Noca_1156 | Noca_1158 | Noca_1156 | Hypothetical protein. | KEGG: cch:Cag_1709 hypothetical protein. | 0.472 |
Noca_1158 | mshB | Noca_1158 | Noca_1157 | Hypothetical protein. | LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.649 |
Noca_1383 | Noca_1515 | Noca_1383 | Noca_1515 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. | 0.540 |
Noca_1383 | Noca_2627 | Noca_1383 | Noca_2627 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | KEGG: nfa:nfa29330 hypothetical protein. | 0.522 |
Noca_1383 | Noca_4348 | Noca_1383 | Noca_4348 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | KEGG: sco:SCO3647 hypothetical protein. | 0.753 |
Noca_1383 | mshA | Noca_1383 | Noca_4050 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | Glycosyl transferase, group 1; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.588 |
Noca_1383 | mshB | Noca_1383 | Noca_1157 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.744 |
Noca_1383 | mshC | Noca_1383 | Noca_2628 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.544 |
Noca_1383 | mshD | Noca_1383 | Noca_4248 | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.789 |
Noca_1515 | Noca_1383 | Noca_1515 | Noca_1383 | TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. | KEGG: mmc:Mmcs_3603 DsbA oxidoreductase. | 0.540 |
Noca_1515 | Noca_2082 | Noca_1515 | Noca_2082 | TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. | KEGG: nfa:nfa13250 hypothetical protein. | 0.507 |
Noca_1515 | mshA | Noca_1515 | Noca_4050 | TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. | Glycosyl transferase, group 1; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.462 |
Noca_1515 | mshB | Noca_1515 | Noca_1157 | TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. | LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.544 |
Noca_2082 | Noca_1515 | Noca_2082 | Noca_1515 | KEGG: nfa:nfa13250 hypothetical protein. | TIGRFAM: Glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sco:SCO5187 glutaredoxin-like protein. | 0.507 |
Noca_2082 | Noca_2627 | Noca_2082 | Noca_2627 | KEGG: nfa:nfa13250 hypothetical protein. | KEGG: nfa:nfa29330 hypothetical protein. | 0.405 |
Noca_2082 | Noca_4348 | Noca_2082 | Noca_4348 | KEGG: nfa:nfa13250 hypothetical protein. | KEGG: sco:SCO3647 hypothetical protein. | 0.467 |
Noca_2082 | mshB | Noca_2082 | Noca_1157 | KEGG: nfa:nfa13250 hypothetical protein. | LmbE family protein; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.645 |
Noca_2082 | mshD | Noca_2082 | Noca_4248 | KEGG: nfa:nfa13250 hypothetical protein. | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.756 |
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