STRINGSTRING
Noca_1164 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1164" - Hexapaptide repeat-containing transferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1164Hexapaptide repeat-containing transferase (171 aa)    
Predicted Functional Partners:
Noca_1165
Cyclase family protein (342 aa)
              0.819
Noca_1163
Glycerate kinase (359 aa)
              0.792
Noca_2952
Carbonic anhydrase; Reversible hydration of carbon dioxide (166 aa)
     
 
  0.698
Noca_1166
Alcohol dehydrogenase (351 aa)
         
  0.623
Noca_1169
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (771 aa)
              0.546
Noca_1168
2Fe-2S iron-sulfur cluster binding domain-containing protein (173 aa)
              0.546
Noca_1167
Molybdopterin dehydrogenase (287 aa)
              0.546
Noca_0524
NADH dehydrogenase subunit E (263 aa)
   
      0.501
Noca_4030
Microcompartments protein (104 aa)
     
 
  0.493
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (230 aa)
   
        0.453
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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