STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1165PFAM: cyclase family protein; KEGG: rxy:Rxyl_0352 putative cyclase. (342 aa)    
Predicted Functional Partners:
Noca_3396
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
  
 0.753
Noca_1164
PFAM: transferase hexapeptide repeat containing protein; KEGG: rha:RHA1_ro05076 possible carbonic anhydrase.
       0.747
Noca_1163
PFAM: glycerate kinase; KEGG: rha:RHA1_ro02573 glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.694
Noca_4085
PFAM: MmgE/PrpD family protein; KEGG: rxy:Rxyl_0368 MmgE/PrpD.
 
     0.628
Noca_1170
PFAM: protein of unknown function UPF0261; KEGG: hma:rrnB0188 hypothetical protein.
 
     0.596
kynA
Tryptophan 2,3-dioxygenase apoenzyme / Tryptophan 2,3-dioxygenase holoenzyme; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
  
 0.589
Noca_1172
PFAM: protein of unknown function DUF849; KEGG: bcn:Bcen_4033 protein of unknown function DUF849.
 
    0.584
Noca_1166
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mta:Moth_2268 alcohol dehydrogenase superfamily, zinc-containing.
       0.569
Noca_4067
PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein.
 
     0.565
Noca_0040
PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein.
 
     0.564
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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