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dapD protein (Nocardioides sp. JS614) - STRING interaction network
"dapD" - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase in Nocardioides sp. JS614
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
dapD2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA (320 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (247 aa)
 
 
  0.995
Noca_4355
Succinyldiaminopimelate aminotransferase (385 aa)
   
 
  0.979
Noca_1193
N-succinyldiaminopimelate aminotransferase (285 aa)
 
 
  0.979
Noca_0426
Dihydrodipicolinate reductase (373 aa)
         
    0.900
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (298 aa)
   
   
  0.802
argD
Acetylornithine aminotransferase (411 aa)
   
 
  0.801
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (466 aa)
 
   
  0.800
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
 
   
  0.786
Noca_1194
Hypothetical protein (320 aa)
              0.784
Noca_1196
Hypothetical protein (174 aa)
              0.775
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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