STRINGSTRING
Noca_1196 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1196" - Hypothetical protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1196Hypothetical protein (174 aa)    
Predicted Functional Partners:
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA (320 aa)
              0.775
Noca_2107
Hypothetical protein (204 aa)
   
          0.770
Noca_3868
DGPFAETKE family protein (160 aa)
   
          0.703
Noca_1194
Hypothetical protein (320 aa)
 
          0.676
Noca_1197
Hypothetical protein (191 aa)
              0.634
Noca_0914
Hypothetical protein (150 aa)
   
          0.634
Noca_4346
Helix-turn-helix, type 11 domain-containing protein (330 aa)
   
          0.624
Noca_3939
Peptidase M6, immune inhibitor A (825 aa)
   
          0.619
Noca_2232
Putative atp/GTP-binding protein (299 aa)
   
          0.614
Noca_4321
ArsR family transcriptional regulator (200 aa)
   
          0.569
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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