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Noca_1210 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1210" - RNA polymerase sigma factor SigE in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1210RNA polymerase sigma factor SigE (230 aa)    
Predicted Functional Partners:
Noca_1211
Hypothetical protein (158 aa)
              0.859
Noca_1212
Peptidase S1 and S6, chymotrypsin/Hap (471 aa)
   
   
  0.838
Noca_1677
Hypothetical protein (239 aa)
     
 
  0.747
Noca_3587
Sigma-70 factor (170 aa)
   
          0.657
sigA
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (495 aa)
     
 
  0.627
Noca_1209
O-methyltransferase family protein (165 aa)
              0.553
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1290 aa)
       
 
  0.536
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (244 aa)
 
          0.520
Noca_1137
Diguanylate cyclase (721 aa)
   
 
 
  0.515
Noca_1139
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (883 aa)
   
 
 
  0.490
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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