STRINGSTRING
Noca_1222 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1222" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1222Hypothetical protein (160 aa)    
Predicted Functional Partners:
Noca_1223
Hypothetical protein (163 aa)
 
       
0.869
Noca_4019
Metallophosphoesterase (480 aa)
   
          0.679
Noca_3123
Hypothetical protein (424 aa)
   
          0.679
Noca_3520
Hypothetical protein (314 aa)
   
          0.669
Noca_3704
Hypothetical protein (366 aa)
   
          0.641
kynA
Tryptophan 2,3-dioxygenase; Catalyzes the oxidative cleavage of the L-tryptophan (L- Trp) pyrrole ring (267 aa)
              0.634
Noca_1216
Hypothetical protein (442 aa)
   
          0.581
Noca_3844
NUDIX hydrolase (152 aa)
   
          0.569
Noca_2960
Hypothetical protein (158 aa)
   
          0.560
Noca_1463
HNH nuclease (414 aa)
   
          0.548
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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