STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1305Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1964 binding-protein-dependent transport permease; TC 3.A.1.1.-. (295 aa)    
Predicted Functional Partners:
Noca_1303
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: pac:PPA1966 bacterial extracellular solute-binding protein; TC 3.A.1.1.-.
 
 0.995
Noca_1304
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1965 binding-protein-dependent transport permease; TC 3.A.1.1.-.
 0.995
Noca_1063
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sco:SCO4240 ABC transporter ATP-binding protein; TC 3.A.1.1.-.
 
 0.972
Noca_3680
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_2417 ABC transporter related; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
 0.967
Noca_0870
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 putative sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
 0.900
Noca_4634
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins; TC 3.A.1.1.-.
 
 0.886
Noca_0060
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease; TC 3.A.1.1.-.
 
 0.885
Noca_0042
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins; TC 3.A.1.1.-.
 
 0.883
Noca_3682
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2419 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
 
 0.874
Noca_1419
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0419 ABC sugar transporter, inner membrane subunit; TC 3.A.1.1.-.
 
 0.868
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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