STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1333PFAM: peptidase S45, penicillin amidase; KEGG: dra:DRA0255 aculeacin A acylase. (799 aa)    
Predicted Functional Partners:
Noca_1327
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sma:SAV3606 putative membrane protein.
       0.642
Noca_1328
KEGG: sma:SAV3606 putative membrane protein.
       0.642
Noca_1329
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: sma:SAV3607 putative integral membrane transport protein.
       0.642
Noca_1330
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
       0.642
Noca_1331
KEGG: sco:SCO2900 membrane protein.
       0.642
Noca_1332
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.
       0.642
Noca_3250
KEGG: bxe:Bxe_A2791 predicted membrane protein.
  
     0.559
Noca_4560
PFAM: Phosphoglycerate mutase; KEGG: mxa:MXAN_5898 hypothetical protein.
  
     0.515
Noca_4403
Hypothetical protein; KEGG: mxa:MXAN_3638 peptidase, M19 family.
 
  
 0.513
Noca_1326
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sma:SAV5176 putative AhpC/TSA family protein.
       0.463
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.