STRINGSTRING
orn protein (Nocardioides sp. JS614) - STRING interaction network
"orn" - Oligoribonuclease in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
ornOligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (222 aa)    
Predicted Functional Partners:
Noca_1306
N-acylglucosamine 2-epimerase (404 aa)
 
            0.759
Noca_1368
Single-strand binding protein (185 aa)
 
 
  0.705
Noca_4663
Single-strand binding protein (188 aa)
 
 
  0.683
Noca_1353
DSBA oxidoreductase (244 aa)
              0.651
Noca_1352
DoxX family protein (161 aa)
              0.646
Noca_3692
ATP-dependent helicase HrpA (1282 aa)
   
        0.562
Noca_1699
GTPase EngC; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (337 aa)
 
   
  0.552
Noca_1713
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (83 aa)
   
          0.523
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (110 aa)
   
        0.479
Noca_3252
Hypothetical protein (102 aa)
   
          0.475
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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