STRINGSTRING
Noca_1352 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1352" - DoxX family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1352DoxX family protein (161 aa)    
Predicted Functional Partners:
Noca_1353
DSBA oxidoreductase (244 aa)
              0.911
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (222 aa)
              0.646
Noca_3960
Hypothetical protein (845 aa)
   
          0.458
Noca_3551
Succinate dehydrogenase subunit C (233 aa)
   
          0.445
Noca_1355
Adenosine deaminase (348 aa)
              0.441
Noca_1354
Hypothetical protein (496 aa)
              0.441
Noca_4558
RDD domain-containing protein (272 aa)
   
          0.409
Noca_1505
Barbiturase (371 aa)
   
          0.405
Noca_0994
GAF domain-containing protein (577 aa)
   
          0.404
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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